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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86821.1PFAM: Carboxymuconolactone decarboxylase; KEGG: pol:Bpro_2144 carboxymuconolactone decarboxylase. (173 aa)    
Predicted Functional Partners:
AEB86413.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: dac:Daci_0909 carboxymuconolactone decarboxylase.
 
  
 0.921
AEB82516.1
PFAM: Carboxymuconolactone decarboxylase; KEGG: axy:AXYL_01971 carboxymuconolactone decarboxylase family protein 2.
  
  
 
0.903
AEB85990.1
TIGRFAM: Muconolactone delta-isomerase; KEGG: mno:Mnod_2374 muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase.
     
  0.900
AEB86822.1
KEGG: pol:Bpro_2143 hypothetical protein.
       0.781
AEB86820.1
KEGG: pol:Bpro_2145 hypothetical protein.
 
     0.743
AEB86819.1
KEGG: pol:Bpro_2146 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
 
   
 0.624
AEB86590.1
2,4-dichlorophenol 6-monooxygenase; KEGG: reu:Reut_B4679 monooxygenase, FAD-binding; PFAM: Monooxygenase, FAD-binding.
  
     0.620
AEB86558.1
KEGG: dia:Dtpsy_3121 hypothetical protein.
 
     0.576
AEB86367.1
Cyclase family protein; PFAM: Putative cyclase; KEGG: aav:Aave_3942 hypothetical protein.
 
     0.507
AEB86818.1
PFAM: Amidohydrolase 2; KEGG: pol:Bpro_2147 amidohydrolase 2.
       0.472
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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