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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86823.1KEGG: dac:Daci_2267 PepSY-associated TM helix domain-containing protein. (404 aa)    
Predicted Functional Partners:
AEB86824.1
KEGG: ctt:CtCNB1_3496 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel.
 
  
 0.862
AEB86825.1
KEGG: dia:Dtpsy_3314 peptidylprolyl isomerase, FKBP-type.
     
 0.494
AEB85179.1
GreA/GreB family elongation factor; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: bbr:BB4124 putative enzyme-regulator fusion protein.
 
     0.473
AEB82997.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: ajs:Ajs_0514 TonB-dependent receptor.
 
  
 0.462
AEB85384.1
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dia:Dtpsy_1918 extracellular solute-binding protein family 5.
  
  
 0.426
AEB84909.1
PFAM: Acyltransferase 3; KEGG: dia:Dtpsy_2295 acyltransferase 3.
  
     0.417
AEB85730.1
PFAM: Outer membrane efflux protein; KEGG: dia:Dtpsy_2209 outer membrane efflux protein.
 
     0.412
AEB86678.1
PFAM: Spore coat protein CotH; KEGG: glo:Glov_2109 spore coat protein CotH.
  
     0.411
AEB85983.1
Protein of unknown function DUF461; PFAM: DR1885-like metal-binding protein; KEGG: dia:Dtpsy_2691 protein of unknown function DUF461.
  
    0.404
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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