STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86827.1KEGG: ctt:CtCNB1_4654 hypothetical protein. (117 aa)    
Predicted Functional Partners:
AEB86828.1
PFAM: Protein of unknown function DUF1446; KEGG: ctt:CtCNB1_4655 NAD-dependent aldehyde dehydrogenase.
 
     0.939
AEB83889.1
PFAM: Protein of unknown function DUF1446; KEGG: sth:STH1574 hypothetical protein.
 
     0.785
AEB84256.1
PFAM: Protein of unknown function DUF1446; KEGG: bpt:Bpet1151 hypothetical protein.
 
     0.785
AEB85377.1
PFAM: Protein of unknown function DUF1446; KEGG: dia:Dtpsy_1910 protein of unknown function DUF1446.
 
     0.785
AEB86826.1
Hypothetical protein; KEGG: ctt:CtCNB1_4653 TctC.
       0.675
AEB86825.1
KEGG: dia:Dtpsy_3314 peptidylprolyl isomerase, FKBP-type.
       0.535
AEB86829.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ctt:CtCNB1_4656 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.512
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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