AEB86830.1 protein (Alicycliphilus denitrificans)

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AEB86830.1

Transcriptional activator ligand binding domain protein; KEGG: aav:Aave_4607 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding. (158 aa)

Predicted Functional Partners:

rpoB

0.753

rpoC

0.610

rpoZ

0.610

rpoA

0.610

rpoD

0.483

rpoH

0.483

AEB86831.1

0.406

Your Current Organism:

Alicycliphilus denitrificans

NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEB86830.1	AEB86831.1	Alide2_4527	Alide2_4528	Transcriptional activator ligand binding domain protein; KEGG: aav:Aave_4607 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding.	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_3318 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.406
AEB86830.1	rpoA	Alide2_4527	Alide2_4352	Transcriptional activator ligand binding domain protein; KEGG: aav:Aave_4607 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.610
AEB86830.1	rpoB	Alide2_4527	Alide2_0409	Transcriptional activator ligand binding domain protein; KEGG: aav:Aave_4607 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.753
AEB86830.1	rpoC	Alide2_4527	Alide2_0410	Transcriptional activator ligand binding domain protein; KEGG: aav:Aave_4607 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.610
AEB86830.1	rpoD	Alide2_4527	Alide2_3600	Transcriptional activator ligand binding domain protein; KEGG: aav:Aave_4607 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding.	RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.483
AEB86830.1	rpoH	Alide2_4527	Alide2_3966	Transcriptional activator ligand binding domain protein; KEGG: aav:Aave_4607 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding.	RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.	0.483
AEB86830.1	rpoZ	Alide2_4527	Alide2_4001	Transcriptional activator ligand binding domain protein; KEGG: aav:Aave_4607 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.610
AEB86831.1	AEB86830.1	Alide2_4528	Alide2_4527	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_3318 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	Transcriptional activator ligand binding domain protein; KEGG: aav:Aave_4607 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding.	0.406
rpoA	AEB86830.1	Alide2_4352	Alide2_4527	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcriptional activator ligand binding domain protein; KEGG: aav:Aave_4607 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding.	0.610
rpoA	rpoB	Alide2_4352	Alide2_0409	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoA	rpoC	Alide2_4352	Alide2_0410	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoA	rpoD	Alide2_4352	Alide2_3600	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.954
rpoA	rpoH	Alide2_4352	Alide2_3966	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.	0.947
rpoA	rpoZ	Alide2_4352	Alide2_4001	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.993
rpoB	AEB86830.1	Alide2_0409	Alide2_4527	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcriptional activator ligand binding domain protein; KEGG: aav:Aave_4607 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding.	0.753
rpoB	rpoA	Alide2_0409	Alide2_4352	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rpoB	rpoC	Alide2_0409	Alide2_0410	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoD	Alide2_0409	Alide2_3600	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.963
rpoB	rpoH	Alide2_0409	Alide2_3966	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.	0.937
rpoB	rpoZ	Alide2_0409	Alide2_4001	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.990

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