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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86831.1PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_3318 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (351 aa)    
Predicted Functional Partners:
AEB83388.1
KEGG: vap:Vapar_5678 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
 
  
 0.756
AEB86369.1
KEGG: bbr:BB4035 putative oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR.
 
  
 0.748
AEB82515.1
KEGG: vap:Vapar_0736 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
 
  
 0.742
AEB86251.1
KEGG: aav:Aave_3940 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
 
  
 0.714
AEB84108.1
acetoacetyl-CoA reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; TIGRFAM: Acetoacetyl-CoA reductase; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase; PFAM: Short-chain dehydrogenase/reductase SDR.
 
  
 0.630
AEB84816.1
TIGRFAM: Acetoacetyl-CoA reductase; KEGG: ajs:Ajs_2072 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.586
AEB86832.1
KEGG: dia:Dtpsy_3319 hypothetical protein.
       0.532
AEB86840.1
KEGG: ajs:Ajs_3977 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR.
 
  
 0.517
AEB82640.1
PFAM: Ribonuclease BN-related; KEGG: ajs:Ajs_0151 ribonuclease BN.
 
     0.498
AEB86833.1
PFAM: DTW; KEGG: ajs:Ajs_3970 DTW domain-containing protein.
       0.480
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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