STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEB86848.1Acyl dehydratase 3; KEGG: axy:AXYL_04789 acyl dehydratase 3. (156 aa)    
Predicted Functional Partners:
AEB86847.1
PFAM: MaoC-like dehydratase; KEGG: axy:AXYL_04788 MaoC-like domain-containing protein 10.
     0.980
AEB86846.1
NADPH:quinone reductase; KEGG: pna:Pnap_2134 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like.
  
 
 0.811
AEB86849.1
PFAM: Extracellular ligand-binding receptor; KEGG: xtr:100489190 leu/Ile/Val-binding protein homolog 6-like.
       0.768
AEB86850.1
Acetate--CoA ligase; KEGG: bur:Bcep18194_C7155 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
  
  
 0.666
AEB82524.1
PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: ajs:Ajs_0062 acyl-CoA dehydrogenase domain-containing protein.
 
 0.597
AEB84046.1
Catalase; KEGG: gpb:HDN1F_12050 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive; Belongs to the catalase family.
   
 0.586
AEB84590.1
PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; KEGG: ctt:CtCNB1_3363 acyl-CoA dehydrogenase-like protein.
 
 0.561
AEB83055.1
KEGG: dia:Dtpsy_0576 hypothetical protein.
  
 
 0.558
AEB85421.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: ctt:CtCNB1_1711 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR.
 
 0.533
AEB83646.1
KEGG: bbr:BB0981 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain.
 
 0.532
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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