close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86851.1KEGG: vei:Veis_4103 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR. (168 aa)    
Predicted Functional Partners:
AEB86424.1
TIGRFAM: Cyclohexanecarboxylate-CoA ligase; KEGG: pna:Pnap_2126 cyclohexanecarboxylate-CoA ligase; PFAM: AMP-dependent synthetase/ligase.
  
   
 0.706
AEB86423.1
TIGRFAM: Cyclohexanecarboxyl-CoA dehydrogenase; KEGG: lch:Lcho_1187 cyclohexanecarboxyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
  
   
 0.690
AEB86421.1
TIGRFAM: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; KEGG: lch:Lcho_1185 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR.
 
   
 0.569
AEB86852.1
KEGG: afw:Anae109_4130 hypothetical protein.
  
  
 0.565
AEB86850.1
Acetate--CoA ligase; KEGG: bur:Bcep18194_C7155 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase.
     
 0.560
AEB86846.1
NADPH:quinone reductase; KEGG: pna:Pnap_2134 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like.
 
   
 0.525
menB
2-ketocyclohexanecarboxyl-CoA hydrolase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
 
  
 0.505
AEB86848.1
Acyl dehydratase 3; KEGG: axy:AXYL_04789 acyl dehydratase 3.
 
   
 0.503
AEB86849.1
PFAM: Extracellular ligand-binding receptor; KEGG: xtr:100489190 leu/Ile/Val-binding protein homolog 6-like.
 
     0.494
AEB85489.1
KEGG: dia:Dtpsy_1968 hypothetical protein.
  
   
 0.470
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.