STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86854.1NAD/NADP octopine/nopaline dehydrogenase; PFAM: Opine dehydrogenase; Ketopantoate reductase ApbA/PanE, N-terminal; KEGG: vap:Vapar_0420 NAD/NADP octopine/nopaline dehydrogenase. (357 aa)    
Predicted Functional Partners:
AEB86855.1
KEGG: vap:Vapar_0421 hypothetical protein.
       0.784
AEB86856.1
KEGG: dia:Dtpsy_3348 histidine kinase; PFAM: Two-component sensor kinase N-terminal; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
       0.675
AEB83146.1
2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: dia:Dtpsy_0631 2OG-Fe(II) oxygenase.
   
    0.666
AEB86857.1
KEGG: ajs:Ajs_3999 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal.
     
 0.524
AEB82987.1
KEGG: axy:AXYL_01758 hypothetical protein.
 
    0.473
AEB82986.1
KEGG: vei:Veis_3993 hypothetical protein.
 
    0.450
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
  
 0.436
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.426
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.