STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AEB86864.1TIGRFAM: Putative phosphonoacetaldehyde dehydrogenase; KEGG: cti:RALTA_B0682 NAD+ dependent acetaldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; Belongs to the aldehyde dehydrogenase family. (482 aa)    
Predicted Functional Partners:
AEB86863.1
Phosphonoacetate hydrolase; KEGG: reu:Reut_B5876 type I phosphodiesterase/nucleotide pyrophosphatase; TIGRFAM: Phosphonoacetate hydrolase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase.
 
  
 0.980
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
 
 0.952
AEB86865.1
TIGRFAM: Phosphonate degradation operon associated HDIG domain protein; KEGG: vei:Veis_1186 HD phosphohydrolase-like protein.
       0.773
AEB86862.1
Transcriptional regulator, GntR family; TIGRFAM: Transcription regulator, 2-aminoethylphosphonate utilisation-associated; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; KEGG: reu:Reut_B5875 GntR family transcriptional regulator; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR.
     
 0.675
AEB86866.1
KEGG: bcm:Bcenmc03_3163 aminophosphonate oxidoreductase; TIGRFAM: Putative aminophosphonate oxidoreductase; PFAM: FAD dependent oxidoreductase.
  
  
 0.599
AEB86861.1
KEGG: reu:Reut_B5874 extracellular solute-binding protein; TIGRFAM: 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component; PFAM: Bacterial extracellular solute-binding, family 1.
 
   
 0.548
AEB85459.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
 
0.515
AEB85554.1
PFAM: Citrate synthase-like; KEGG: rme:Rmet_4144 citrate synthase.
 
 0.509
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 0.497
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.488
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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