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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86870.1Regulatory protein MarR; PFAM: HTH transcriptional regulator, MarR; KEGG: ajs:Ajs_4000 MarR family transcriptional regulator. (159 aa)    
Predicted Functional Partners:
AEB84503.1
PFAM: Protein of unknown function DUF349; KEGG: dia:Dtpsy_2041 hypothetical protein.
 
     0.773
AEB82893.1
PFAM: Protein of unknown function DUF3567; KEGG: ajs:Ajs_0446 hypothetical protein.
  
     0.747
AEB85611.1
PFAM: Major facilitator superfamily MFS-1; KEGG: dia:Dtpsy_1372 major facilitator superfamily MFS_1.
 
   
 0.740
AEB85933.1
KEGG: dia:Dtpsy_2492 putative transcriptional regulator.
  
  
 0.735
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.725
AEB83329.1
KEGG: dia:Dtpsy_0798 hypothetical protein.
  
     0.723
AEB82664.1
Fertility inhibition FinO-like protein; KEGG: dia:Dtpsy_0187 ProQ activator of osmoprotectant transporter ProP; PFAM: Fertility inhibition FinO/ProQ; SMART: Fertility inhibition FinO/ProQ.
  
     0.720
AEB86407.1
Beta-lactamase domain protein; Manually curated; PFAM: Beta-lactamase-like; NUDIX hydrolase domain; KEGG: dia:Dtpsy_3001 beta-lactamase domain protein; SMART: Beta-lactamase-like.
  
  
 0.716
AEB82475.1
PFAM: Domain of unknown function DUF1520; KEGG: ajs:Ajs_0007 hypothetical protein.
  
     0.711
AEB85536.1
KEGG: ajs:Ajs_1718 DNA-directed DNA polymerase.
  
     0.702
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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