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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86903.1KEGG: pol:Bpro_4676 cyclic-AMP phosphodiesterase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like. (262 aa)    
Predicted Functional Partners:
AEB84979.1
KEGG: dar:Daro_3357 hypothetical protein; PFAM: GAF; Metal-dependent phosphohydrolase, HD subdomain; SMART: GAF; Metal-dependent phosphohydrolase, HD domain.
     0.931
AEB86904.1
KEGG: ajs:Ajs_4043 FHA domain-containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain.
 
     0.809
AEB84676.1
ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; KEGG: aav:Aave_2318 ErfK/YbiS/YcfS/YnhG.
  
     0.726
AEB84677.1
PFAM: Tetratricopeptide TPR-1; KEGG: aav:Aave_2319 TPR repeat-containing protein.
  
     0.701
AEB86905.1
KEGG: ajs:Ajs_4044 protein phosphatase 2C domain-containing protein; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-like.
 
     0.554
AEB83677.1
KEGG: dia:Dtpsy_2621 putative transmembrane protein.
  
     0.506
AEB86715.1
KEGG: lch:Lcho_2907 type IV pilus assembly protein PilW.
  
     0.482
AEB86902.1
Manually curated; KEGG: pau:PA14_58730 type IV pilin structural subunit; Belongs to the N-Me-Phe pilin family.
       0.411
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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