STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86934.1PFAM: Porin, Gram-negative type; KEGG: vei:Veis_0301 porin. (361 aa)    
Predicted Functional Partners:
AEB86933.1
KEGG: vei:Veis_0300 hypothetical protein.
       0.705
AEB84508.1
PFAM: Thioredoxin domain; KEGG: dia:Dtpsy_1244 hypothetical protein.
  
     0.650
AEB86913.1
KEGG: ajs:Ajs_4052 putative lipoprotein transmembrane.
  
   
 0.642
AEB86935.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pna:Pnap_3816 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
   
 0.632
AEB85476.1
PFAM: Protein of unknown function DUF3106; KEGG: ajs:Ajs_1766 putative transmembrane protein.
  
     0.613
AEB86845.1
Sporulation domain-containing protein; PFAM: Sporulation-related domain; KEGG: dia:Dtpsy_3342 sporulation domain protein.
  
     0.597
AEB82868.1
Putative transcriptional regulator, Crp/Fnr family; KEGG: dia:Dtpsy_0411 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain.
  
    0.581
AEB83236.1
PFAM: VacJ-like lipoprotein; KEGG: ajs:Ajs_0751 VacJ family lipoprotein.
 
 
 
 0.579
AEB84487.1
Hydroxybutyrate-dimer hydrolase; KEGG: dia:Dtpsy_2060 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane; PFAM: D-(-)-3-hydroxybutyrate oligomer hydrolase, putative.
  
     0.571
AEB83000.1
KEGG: dia:Dtpsy_0533 PGAP1 family protein.
  
    0.569
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.