Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB86953.1KEGG: pzu:PHZ_c2530 hypothetical protein. (379 aa)    
Predicted Functional Partners:
AEB86954.1
Acetate--CoA ligase; KEGG: gka:GK2759 acetyl-CoA synthetase (acetate-CoA ligase); PFAM: AMP-dependent synthetase/ligase.
 
  
 0.881
AEB86952.1
Formyl-CoA transferase; KEGG: rpf:Rpic12D_1541 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
 
 0.822
AEB86951.1
KEGG: aav:Aave_3937 hypothetical protein.
       0.661
AEB86950.1
KEGG: bxe:Bxe_C0866 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal.
 
     0.613
AEB84046.1
Catalase; KEGG: gpb:HDN1F_12050 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive; Belongs to the catalase family.
   
 0.586
AEB84219.1
KEGG: pol:Bpro_5277 acyl-CoA dehydrogenase-like; PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1.
 
 0.576
AEB83558.1
PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: vap:Vapar_1314 acyl-CoA dehydrogenase domain protein.
 
 0.572
AEB84226.1
KEGG: vap:Vapar_1314 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain.
 
 0.554
AEB83932.1
PFAM: Crotonase, core; KEGG: bbr:BB0629 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.530
AEB82469.1
PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; KEGG: axy:AXYL_04410 acyl-CoA dehydrogenase, middle domain-containing protein 12.
 
 0.518
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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