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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86960.1KEGG: axy:AXYL_05206 hypothetical protein. (103 aa)    
Predicted Functional Partners:
AEB86961.1
PFAM: Flavoprotein transmembrane component; FAD-binding 8; KEGG: dia:Dtpsy_3433 ferric reductase domain protein transmembrane component.
       0.695
AEB86959.1
PFAM: Peptidase M4, propeptide, PepSY; KEGG: dia:Dtpsy_3432 propeptide PepSY amd peptidase M4.
       0.595
AEB86958.1
KEGG: dia:Dtpsy_3431 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal.
  
    0.531
AEB86965.1
PFAM: Oxidoreductase FAD/NAD(P)-binding; Flavodoxin/nitric oxide synthase; PepSY-associated TM helix; Oxidoreductase, FAD-binding domain; KEGG: ajs:Ajs_4088 oxidoreductase FAD/NAD(P)-binding subunit.
       0.496
AEB86962.1
PFAM: Cytochrome b/b6, N-terminal; KEGG: pag:PLES_43981 cytochrome b561.
       0.488
AEB86957.1
KEGG: ajs:Ajs_4082 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain.
       0.406
AEB86964.1
KEGG: ajs:Ajs_4087 hypothetical protein.
       0.402
AEB86963.1
KEGG: dia:Dtpsy_3434 hypothetical protein.
       0.400
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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