STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86988.1KEGG: dia:Dtpsy_3448 putative transmembrane protein. (494 aa)    
Predicted Functional Partners:
AEB86989.1
PFAM: Band 7 protein; KEGG: ajs:Ajs_4099 putative transmembrane protein.
 
  
 0.950
AEB86987.1
PFAM: Protein of unknown function DUF350; KEGG: dia:Dtpsy_3447 protein of unknown function DUF350.
 
     0.943
speE-2
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
     0.928
AEB86985.1
PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: ajs:Ajs_4093 twin-arginine translocation pathway signal.
 
     0.915
AEB82817.1
PFAM: Protein of unknown function DUF477; KEGG: ajs:Ajs_0315 hypothetical protein.
  
  
 0.682
AEB85081.1
PFAM: Protein of unknown function DUF477; KEGG: ajs:Ajs_2693 hypothetical protein.
  
  
 0.682
AEB85707.1
PFAM: Protein of unknown function DUF477; KEGG: ajs:Ajs_1510 hypothetical protein.
  
  
 0.682
speH
S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.
 
     0.565
AEB82486.1
PFAM: Outer membrane efflux protein; KEGG: xtr:100485479 hypothetical protein LOC100485479.
  
     0.550
AEB85369.1
KEGG: ajs:Ajs_1826 hypothetical protein.
  
     0.534
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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