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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB86992.1PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_3454 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (314 aa)    
Predicted Functional Partners:
AEB86993.1
Beta-alanine--pyruvate transaminase; KEGG: xtr:100492879 omega-amino acid--pyruvate aminotransferase-like; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.849
AEB86991.1
PFAM: Flagellar basal body rod protein, N-terminal; Domain of unknown function DUF1078, C-terminal; KEGG: dia:Dtpsy_3453 flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
       0.605
AEB87033.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aav:Aave_1935 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.528
AEB86994.1
TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: dia:Dtpsy_3456 methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain.
 
     0.508
AEB85933.1
KEGG: dia:Dtpsy_2492 putative transcriptional regulator.
  
  
 0.496
AEB85104.1
KEGG: ajs:Ajs_1464 hypothetical protein.
  
     0.476
AEB83391.1
PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: aav:Aave_1392 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.448
AEB86922.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_3404 transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.448
AEB84562.1
KEGG: dia:Dtpsy_2195 hypothetical protein.
  
     0.441
AEB82664.1
Fertility inhibition FinO-like protein; KEGG: dia:Dtpsy_0187 ProQ activator of osmoprotectant transporter ProP; PFAM: Fertility inhibition FinO/ProQ; SMART: Fertility inhibition FinO/ProQ.
  
   
 0.440
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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