Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEB87006.1PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor). (141 aa)    
Predicted Functional Partners:
AEB87005.1
PFAM: Guanine-specific ribonuclease N1/T1; KEGG: dia:Dtpsy_3466 guanine-specific ribonuclease N1 and T1.
 
 
 0.965
AEB83005.1
KEGG: ajs:Ajs_0522 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase (GNAT) domain.
  
     0.756
AEB85016.1
KEGG: ajs:Ajs_2364 putative inner membrane transmembrane protein.
  
     0.756
AEB83945.1
PFAM: Histone-like nucleoid-structuring protein H-NS; KEGG: ctt:CtCNB1_0646 histone-like nucleoid-structuring protein H-NS.
  
     0.749
AEB86010.1
KEGG: dia:Dtpsy_2705 hypothetical protein.
  
     0.749
AEB86734.1
Protein of unknown function DUF132; KEGG: dia:Dtpsy_0340 hypothetical protein; TIGRFAM: Protein of unknown function DUF132; SMART: Nucleotide binding protein, PINc.
  
     0.748
AEB83828.1
Protein of unknown function DUF540; PFAM: Uncharacterised protein family CysZ; KEGG: dia:Dtpsy_1107 putative transmembrane protein.
  
     0.747
AEB83426.1
PFAM: Protein of unknown function DUF3460; KEGG: ajs:Ajs_3491 hypothetical protein.
  
     0.744
AEB85601.1
KEGG: ajs:Ajs_2473 hypothetical protein.
  
     0.743
AEB86916.1
PFAM: Branched-chain amino acid transport, AzlD; KEGG: dia:Dtpsy_3400 branched-chain amino acid transport.
  
     0.743
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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