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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB87017.1KEGG: dia:Dtpsy_3482 methionine biosynthesis protein MetW; TIGRFAM: Methionine biosynthesis MetW; PFAM: Methionine biosynthesis MetW. (194 aa)    
Predicted Functional Partners:
metXS
Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
  
 0.998
thrB
TIGRFAM: Homoserine kinase ThrB; KEGG: ajs:Ajs_3320 homoserine kinase; PFAM: Aminoglycoside phosphotransferase; Belongs to the pseudomonas-type ThrB family.
  
     0.640
AEB87019.1
Protein of unknown function UPF0016; PFAM: Uncharacterised protein family UPF0016; KEGG: dia:Dtpsy_3484 protein of unknown function UPF0016.
       0.509
AEB83715.1
PFAM: Cytochrome P450; KEGG: ajs:Ajs_3226 cytochrome P450.
   
 
 0.446
AEB87016.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dia:Dtpsy_3480 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
       0.440
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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