close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB87029.1Putative transcriptional regulator, Crp/Fnr family; KEGG: dia:Dtpsy_3494 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain. (161 aa)    
Predicted Functional Partners:
AEB82868.1
Putative transcriptional regulator, Crp/Fnr family; KEGG: dia:Dtpsy_0411 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain.
  
  
 0.958
AEB85456.1
KEGG: ajs:Ajs_1779 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp.
  
  
 0.923
AEB86080.1
KEGG: dia:Dtpsy_0976 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain.
  
  
  0.921
AEB82925.1
KEGG: ajs:Ajs_0473 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain.
  
  
  0.920
AEB85266.1
KEGG: aav:Aave_3080 putative adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain; Adenylyl cyclase class-3/4/guanylyl cyclase.
 
 0.708
mnmE
tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
     
 0.647
AEB83359.1
PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; KEGG: ajs:Ajs_0898 TPR repeat-containing protein.
   
 0.533
AEB83253.1
KEGG: ajs:Ajs_0769 putative transmembrane protein.
   
 0.532
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.526
AEB87028.1
KEGG: ajs:Ajs_4136 hypothetical protein.
       0.522
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.