STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfT_1Energy-coupling factor transporter transmembrane protein EcfT. (296 aa)    
Predicted Functional Partners:
SCJ09179.1
Predicted membrane protein.
 
 0.990
ykoD_1
Putative HMP/thiamine import ATP-binding protein YkoD.
 
 0.989
ecfA2
Energy-coupling factor transporter ATP-binding protein EcfA2.
  
 0.984
ecfA1_2
Energy-coupling factor transporter ATP-binding protein EcfA1.
  
 0.981
bioY
Biotin ECF transporter S component BioY.
  
 0.962
SCJ09032.1
Uncharacterised protein.
 
     0.948
SCJ08989.1
Outer membrane assembly lipoprotein YfgL.
 
     0.930
SCJ60986.1
Uncharacterised protein.
  
 0.915
hmpT
Thiamine precursor ECF transporter S component HmpT.
  
 0.853
artQ_2
Arginine transport system permease protein ArtQ.
   
 
  0.837
Your Current Organism:
uncultured Clostridium sp.
NCBI taxonomy Id: 59620
Other names: Clostridium sp. 1C11, Clostridium sp. 1C4, Clostridium sp. 1C8, Clostridium sp. 1D10, Clostridium sp. 1G2, Clostridium sp. 2A9, u. Clostridium sp., uncultured Anaerobacter sp.
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.