Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCJ60092.1 | SCJ60138.1 | SAMEA3545404_01841 | SAMEA3545404_01843 | Xylose isomerase-like TIM barrel. | DNA-binding protein%2C YbaB/EbfC family. | 0.541 |
SCJ60092.1 | SCJ60182.1 | SAMEA3545404_01841 | SAMEA3545404_01845 | Xylose isomerase-like TIM barrel. | Uncharacterised protein. | 0.427 |
SCJ60092.1 | dnaX_2 | SAMEA3545404_01841 | SAMEA3545404_01844 | Xylose isomerase-like TIM barrel. | DNA polymerase III subunit tau. | 0.474 |
SCJ60092.1 | recR | SAMEA3545404_01841 | SAMEA3545404_01842 | Xylose isomerase-like TIM barrel. | Recombination protein RecR. | 0.613 |
SCJ60138.1 | SCJ60092.1 | SAMEA3545404_01843 | SAMEA3545404_01841 | DNA-binding protein%2C YbaB/EbfC family. | Xylose isomerase-like TIM barrel. | 0.541 |
SCJ60138.1 | SCJ60182.1 | SAMEA3545404_01843 | SAMEA3545404_01845 | DNA-binding protein%2C YbaB/EbfC family. | Uncharacterised protein. | 0.594 |
SCJ60138.1 | dnaX_2 | SAMEA3545404_01843 | SAMEA3545404_01844 | DNA-binding protein%2C YbaB/EbfC family. | DNA polymerase III subunit tau. | 0.889 |
SCJ60138.1 | recR | SAMEA3545404_01843 | SAMEA3545404_01842 | DNA-binding protein%2C YbaB/EbfC family. | Recombination protein RecR. | 0.945 |
SCJ60182.1 | SCJ60092.1 | SAMEA3545404_01845 | SAMEA3545404_01841 | Uncharacterised protein. | Xylose isomerase-like TIM barrel. | 0.427 |
SCJ60182.1 | SCJ60138.1 | SAMEA3545404_01845 | SAMEA3545404_01843 | Uncharacterised protein. | DNA-binding protein%2C YbaB/EbfC family. | 0.594 |
SCJ60182.1 | dnaX_2 | SAMEA3545404_01845 | SAMEA3545404_01844 | Uncharacterised protein. | DNA polymerase III subunit tau. | 0.686 |
SCJ60182.1 | mdtK_5 | SAMEA3545404_01845 | SAMEA3545404_01846 | Uncharacterised protein. | Multidrug-efflux transporter. | 0.452 |
SCJ60182.1 | recR | SAMEA3545404_01845 | SAMEA3545404_01842 | Uncharacterised protein. | Recombination protein RecR. | 0.526 |
dnaX_2 | SCJ60092.1 | SAMEA3545404_01844 | SAMEA3545404_01841 | DNA polymerase III subunit tau. | Xylose isomerase-like TIM barrel. | 0.474 |
dnaX_2 | SCJ60138.1 | SAMEA3545404_01844 | SAMEA3545404_01843 | DNA polymerase III subunit tau. | DNA-binding protein%2C YbaB/EbfC family. | 0.889 |
dnaX_2 | SCJ60182.1 | SAMEA3545404_01844 | SAMEA3545404_01845 | DNA polymerase III subunit tau. | Uncharacterised protein. | 0.686 |
dnaX_2 | mdtK_5 | SAMEA3545404_01844 | SAMEA3545404_01846 | DNA polymerase III subunit tau. | Multidrug-efflux transporter. | 0.409 |
dnaX_2 | recR | SAMEA3545404_01844 | SAMEA3545404_01842 | DNA polymerase III subunit tau. | Recombination protein RecR. | 0.894 |
mdtK_5 | SCJ60182.1 | SAMEA3545404_01846 | SAMEA3545404_01845 | Multidrug-efflux transporter. | Uncharacterised protein. | 0.452 |
mdtK_5 | dnaX_2 | SAMEA3545404_01846 | SAMEA3545404_01844 | Multidrug-efflux transporter. | DNA polymerase III subunit tau. | 0.409 |
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