Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCJ60352.1 | SCJ60372.1 | SAMEA3545404_01854 | SAMEA3545404_01855 | Uncharacterised protein. | Uncharacterized protein conserved in bacteria. | 0.661 |
SCJ60352.1 | SCJ60393.1 | SAMEA3545404_01854 | SAMEA3545404_01856 | Uncharacterised protein. | NfeD-like C-terminal%2C partner-binding. | 0.459 |
SCJ60352.1 | lytR | SAMEA3545404_01854 | SAMEA3545404_01853 | Uncharacterised protein. | Sensory transduction protein lytR. | 0.590 |
SCJ60372.1 | SCJ60352.1 | SAMEA3545404_01855 | SAMEA3545404_01854 | Uncharacterized protein conserved in bacteria. | Uncharacterised protein. | 0.661 |
SCJ60372.1 | SCJ60393.1 | SAMEA3545404_01855 | SAMEA3545404_01856 | Uncharacterized protein conserved in bacteria. | NfeD-like C-terminal%2C partner-binding. | 0.970 |
SCJ60372.1 | citS | SAMEA3545404_01855 | SAMEA3545404_01857 | Uncharacterized protein conserved in bacteria. | Sensor protein CitS. | 0.526 |
SCJ60372.1 | lytR | SAMEA3545404_01855 | SAMEA3545404_01853 | Uncharacterized protein conserved in bacteria. | Sensory transduction protein lytR. | 0.626 |
SCJ60393.1 | SCJ60352.1 | SAMEA3545404_01856 | SAMEA3545404_01854 | NfeD-like C-terminal%2C partner-binding. | Uncharacterised protein. | 0.459 |
SCJ60393.1 | SCJ60372.1 | SAMEA3545404_01856 | SAMEA3545404_01855 | NfeD-like C-terminal%2C partner-binding. | Uncharacterized protein conserved in bacteria. | 0.970 |
SCJ60393.1 | citS | SAMEA3545404_01856 | SAMEA3545404_01857 | NfeD-like C-terminal%2C partner-binding. | Sensor protein CitS. | 0.641 |
SCJ60393.1 | ecsA_2 | SAMEA3545404_01856 | SAMEA3545404_01859 | NfeD-like C-terminal%2C partner-binding. | ABC-type transporter ATP-binding protein EcsA. | 0.419 |
SCJ60393.1 | lytR | SAMEA3545404_01856 | SAMEA3545404_01853 | NfeD-like C-terminal%2C partner-binding. | Sensory transduction protein lytR. | 0.517 |
citS | SCJ60372.1 | SAMEA3545404_01857 | SAMEA3545404_01855 | Sensor protein CitS. | Uncharacterized protein conserved in bacteria. | 0.526 |
citS | SCJ60393.1 | SAMEA3545404_01857 | SAMEA3545404_01856 | Sensor protein CitS. | NfeD-like C-terminal%2C partner-binding. | 0.641 |
citS | ecsA_2 | SAMEA3545404_01857 | SAMEA3545404_01859 | Sensor protein CitS. | ABC-type transporter ATP-binding protein EcsA. | 0.454 |
citS | lytR | SAMEA3545404_01857 | SAMEA3545404_01853 | Sensor protein CitS. | Sensory transduction protein lytR. | 0.946 |
ecsA_2 | SCJ60393.1 | SAMEA3545404_01859 | SAMEA3545404_01856 | ABC-type transporter ATP-binding protein EcsA. | NfeD-like C-terminal%2C partner-binding. | 0.419 |
ecsA_2 | citS | SAMEA3545404_01859 | SAMEA3545404_01857 | ABC-type transporter ATP-binding protein EcsA. | Sensor protein CitS. | 0.454 |
lytR | SCJ60352.1 | SAMEA3545404_01853 | SAMEA3545404_01854 | Sensory transduction protein lytR. | Uncharacterised protein. | 0.590 |
lytR | SCJ60372.1 | SAMEA3545404_01853 | SAMEA3545404_01855 | Sensory transduction protein lytR. | Uncharacterized protein conserved in bacteria. | 0.626 |
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