Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCJ39091.1 | ecfT_4 | SAMEA3545404_01342 | SAMEA3545404_01978 | Predicted membrane protein. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.855 |
SCJ39091.1 | queT | SAMEA3545404_01342 | SAMEA3545404_00289 | Predicted membrane protein. | Queuosine precursor ECF transporter S component QueT. | 0.435 |
SCJ39091.1 | ribU | SAMEA3545404_01342 | SAMEA3545404_02313 | Predicted membrane protein. | Riboflavin ECF transporter S component RibU. | 0.658 |
SCJ39091.1 | thiT | SAMEA3545404_01342 | SAMEA3545404_02032 | Predicted membrane protein. | Thiamine ECF transporter S component ThiT. | 0.524 |
ecfT_4 | SCJ39091.1 | SAMEA3545404_01978 | SAMEA3545404_01342 | Energy-coupling factor transporter transmembrane protein EcfT. | Predicted membrane protein. | 0.855 |
ecfT_4 | ribU | SAMEA3545404_01978 | SAMEA3545404_02313 | Energy-coupling factor transporter transmembrane protein EcfT. | Riboflavin ECF transporter S component RibU. | 0.448 |
ecfT_4 | thiT | SAMEA3545404_01978 | SAMEA3545404_02032 | Energy-coupling factor transporter transmembrane protein EcfT. | Thiamine ECF transporter S component ThiT. | 0.436 |
queT | SCJ39091.1 | SAMEA3545404_00289 | SAMEA3545404_01342 | Queuosine precursor ECF transporter S component QueT. | Predicted membrane protein. | 0.435 |
queT | ribU | SAMEA3545404_00289 | SAMEA3545404_02313 | Queuosine precursor ECF transporter S component QueT. | Riboflavin ECF transporter S component RibU. | 0.557 |
queT | thiT | SAMEA3545404_00289 | SAMEA3545404_02032 | Queuosine precursor ECF transporter S component QueT. | Thiamine ECF transporter S component ThiT. | 0.528 |
ribU | SCJ39091.1 | SAMEA3545404_02313 | SAMEA3545404_01342 | Riboflavin ECF transporter S component RibU. | Predicted membrane protein. | 0.658 |
ribU | ecfT_4 | SAMEA3545404_02313 | SAMEA3545404_01978 | Riboflavin ECF transporter S component RibU. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.448 |
ribU | queT | SAMEA3545404_02313 | SAMEA3545404_00289 | Riboflavin ECF transporter S component RibU. | Queuosine precursor ECF transporter S component QueT. | 0.557 |
ribU | thiT | SAMEA3545404_02313 | SAMEA3545404_02032 | Riboflavin ECF transporter S component RibU. | Thiamine ECF transporter S component ThiT. | 0.598 |
thiD | thiT | SAMEA3545404_00318 | SAMEA3545404_02032 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiamine ECF transporter S component ThiT. | 0.444 |
thiT | SCJ39091.1 | SAMEA3545404_02032 | SAMEA3545404_01342 | Thiamine ECF transporter S component ThiT. | Predicted membrane protein. | 0.524 |
thiT | ecfT_4 | SAMEA3545404_02032 | SAMEA3545404_01978 | Thiamine ECF transporter S component ThiT. | Energy-coupling factor transporter transmembrane protein EcfT. | 0.436 |
thiT | queT | SAMEA3545404_02032 | SAMEA3545404_00289 | Thiamine ECF transporter S component ThiT. | Queuosine precursor ECF transporter S component QueT. | 0.528 |
thiT | ribU | SAMEA3545404_02032 | SAMEA3545404_02313 | Thiamine ECF transporter S component ThiT. | Riboflavin ECF transporter S component RibU. | 0.598 |
thiT | thiD | SAMEA3545404_02032 | SAMEA3545404_00318 | Thiamine ECF transporter S component ThiT. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.444 |
page 1 of 2