node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFM64325.1 | pnp | HMPREF0634_0262 | HMPREF0634_0130 | tRNA nucleotidyltransferase/poly(A) polymerase family protein; Identified by match to protein family HMM PF01743; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.807 |
EFM64325.1 | rny | HMPREF0634_0262 | HMPREF0634_0397 | tRNA nucleotidyltransferase/poly(A) polymerase family protein; Identified by match to protein family HMM PF01743; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.740 |
EFM64707.1 | EFM64997.1 | HMPREF0634_0283 | HMPREF0634_1418 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family. | 0.906 |
EFM64707.1 | pnp | HMPREF0634_0283 | HMPREF0634_0130 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.898 |
EFM64707.1 | rny | HMPREF0634_0283 | HMPREF0634_0397 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.748 |
EFM64707.1 | rpsO | HMPREF0634_0283 | HMPREF0634_0132 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.731 |
EFM64865.1 | rny | HMPREF0634_0005 | HMPREF0634_0397 | PSP1 C-terminal domain protein; Identified by match to protein family HMM PF04468. | YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.859 |
EFM64997.1 | EFM64707.1 | HMPREF0634_1418 | HMPREF0634_0283 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family. | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | 0.906 |
EFM64997.1 | pnp | HMPREF0634_1418 | HMPREF0634_0130 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.898 |
EFM64997.1 | rny | HMPREF0634_1418 | HMPREF0634_0397 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family. | YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.748 |
EFM64997.1 | rpsO | HMPREF0634_1418 | HMPREF0634_0132 | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.731 |
pfkA | rny | HMPREF0634_0552 | HMPREF0634_0397 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.870 |
pnp | EFM64325.1 | HMPREF0634_0130 | HMPREF0634_0262 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | tRNA nucleotidyltransferase/poly(A) polymerase family protein; Identified by match to protein family HMM PF01743; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.807 |
pnp | EFM64707.1 | HMPREF0634_0130 | HMPREF0634_0283 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271. | 0.898 |
pnp | EFM64997.1 | HMPREF0634_0130 | HMPREF0634_1418 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family. | 0.898 |
pnp | rnj | HMPREF0634_0130 | HMPREF0634_0121 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.512 |
pnp | rny | HMPREF0634_0130 | HMPREF0634_0397 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.907 |
pnp | rpsO | HMPREF0634_0130 | HMPREF0634_0132 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.768 |
pnp | tig | HMPREF0634_0130 | HMPREF0634_1496 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.635 |
ribB | rny | HMPREF0634_0845 | HMPREF0634_0397 | 3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.860 |