STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM64276.1Hypothetical protein. (287 aa)    
Predicted Functional Partners:
EFM64247.1
Hypothetical protein.
 
     0.945
EFM64285.1
Hypothetical protein.
 
     0.864
EFM64283.1
Identified by match to protein family HMM PF02534.
 
     0.846
EFM64365.1
Hypothetical protein.
 
     0.781
EFM64267.1
Hypothetical protein.
 
     0.781
EFM64448.1
Hypothetical protein.
 
     0.775
EFM65115.1
Hypothetical protein.
 
     0.770
EFM64416.1
Identified by match to protein family HMM PF02534.
 
     0.766
EFM64249.1
Hypothetical protein.
 
    0.766
EFM64255.1
Identified by match to protein family HMM PF00877.
 
     0.760
Your Current Organism:
Peptostreptococcus stomatis
NCBI taxonomy Id: 596315
Other names: P. stomatis DSM 17678, Peptostreptococcus stomatis DSM 17678, Peptostreptococcus stomatis str. DSM 17678, Peptostreptococcus stomatis strain DSM 17678
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.