STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM64632.1Hypothetical protein. (79 aa)    
Predicted Functional Partners:
EFM64179.1
Hypothetical protein.
  
     0.765
EFM64190.1
Hypothetical protein.
  
     0.740
EFM64701.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
     0.716
EFM64647.1
Hypothetical protein.
  
     0.712
EFM65461.1
Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
  
     0.681
EFM65377.1
Hypothetical protein.
  
     0.680
EFM64748.1
Site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family.
  
     0.646
EFM64224.1
Identified by match to protein family HMM PF02810.
  
     0.597
EFM64867.1
Identified by match to protein family HMM PF09529; match to protein family HMM TIGR02206.
  
     0.580
EFM65402.1
Hypothetical protein.
  
     0.574
Your Current Organism:
Peptostreptococcus stomatis
NCBI taxonomy Id: 596315
Other names: P. stomatis DSM 17678, Peptostreptococcus stomatis DSM 17678, Peptostreptococcus stomatis str. DSM 17678, Peptostreptococcus stomatis strain DSM 17678
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.