Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEV19110.1 | EEV20093.1 | TREVI0001_0214 | TREVI0001_0859 | Hypothetical protein. | Identified by match to protein family HMM TIGR02328. | 0.505 |
EEV19110.1 | EEV20495.1 | TREVI0001_0214 | TREVI0001_0317 | Hypothetical protein. | Putative DNA-directed RNA polymerase, omega subunit; Identified by match to protein family HMM PF04239. | 0.591 |
EEV20093.1 | EEV19110.1 | TREVI0001_0859 | TREVI0001_0214 | Identified by match to protein family HMM TIGR02328. | Hypothetical protein. | 0.505 |
EEV20093.1 | EEV20495.1 | TREVI0001_0859 | TREVI0001_0317 | Identified by match to protein family HMM TIGR02328. | Putative DNA-directed RNA polymerase, omega subunit; Identified by match to protein family HMM PF04239. | 0.449 |
EEV20093.1 | EEV21496.1 | TREVI0001_0859 | TREVI0001_0697 | Identified by match to protein family HMM TIGR02328. | Hypothetical protein. | 0.535 |
EEV20494.1 | EEV20495.1 | TREVI0001_0316 | TREVI0001_0317 | Hypothetical protein; Identified by glimmer; putative. | Putative DNA-directed RNA polymerase, omega subunit; Identified by match to protein family HMM PF04239. | 0.498 |
EEV20495.1 | EEV19110.1 | TREVI0001_0317 | TREVI0001_0214 | Putative DNA-directed RNA polymerase, omega subunit; Identified by match to protein family HMM PF04239. | Hypothetical protein. | 0.591 |
EEV20495.1 | EEV20093.1 | TREVI0001_0317 | TREVI0001_0859 | Putative DNA-directed RNA polymerase, omega subunit; Identified by match to protein family HMM PF04239. | Identified by match to protein family HMM TIGR02328. | 0.449 |
EEV20495.1 | EEV20494.1 | TREVI0001_0317 | TREVI0001_0316 | Putative DNA-directed RNA polymerase, omega subunit; Identified by match to protein family HMM PF04239. | Hypothetical protein; Identified by glimmer; putative. | 0.498 |
EEV20495.1 | EEV21496.1 | TREVI0001_0317 | TREVI0001_0697 | Putative DNA-directed RNA polymerase, omega subunit; Identified by match to protein family HMM PF04239. | Hypothetical protein. | 0.694 |
EEV21496.1 | EEV20093.1 | TREVI0001_0697 | TREVI0001_0859 | Hypothetical protein. | Identified by match to protein family HMM TIGR02328. | 0.535 |
EEV21496.1 | EEV20495.1 | TREVI0001_0697 | TREVI0001_0317 | Hypothetical protein. | Putative DNA-directed RNA polymerase, omega subunit; Identified by match to protein family HMM PF04239. | 0.694 |