Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEV21503.1 | EEV21504.1 | TREVI0001_0712 | TREVI0001_0713 | Hypothetical protein. | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | 0.773 |
EEV21503.1 | EEV21505.1 | TREVI0001_0712 | TREVI0001_0714 | Hypothetical protein. | Hypothetical protein. | 0.705 |
EEV21503.1 | EEV21506.1 | TREVI0001_0712 | TREVI0001_0715 | Hypothetical protein. | Glycosyltransferase family 28 C-terminal domain protein; Identified by match to protein family HMM PF00534; match to protein family HMM PF04101. | 0.421 |
EEV21503.1 | EEV21507.1 | TREVI0001_0712 | TREVI0001_0716 | Hypothetical protein. | Outer membrane insertion signal domain protein. | 0.419 |
EEV21504.1 | EEV21503.1 | TREVI0001_0713 | TREVI0001_0712 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Hypothetical protein. | 0.773 |
EEV21504.1 | EEV21505.1 | TREVI0001_0713 | TREVI0001_0714 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Hypothetical protein. | 0.705 |
EEV21504.1 | EEV21506.1 | TREVI0001_0713 | TREVI0001_0715 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Glycosyltransferase family 28 C-terminal domain protein; Identified by match to protein family HMM PF00534; match to protein family HMM PF04101. | 0.468 |
EEV21504.1 | EEV21507.1 | TREVI0001_0713 | TREVI0001_0716 | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | Outer membrane insertion signal domain protein. | 0.419 |
EEV21505.1 | EEV21503.1 | TREVI0001_0714 | TREVI0001_0712 | Hypothetical protein. | Hypothetical protein. | 0.705 |
EEV21505.1 | EEV21504.1 | TREVI0001_0714 | TREVI0001_0713 | Hypothetical protein. | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | 0.705 |
EEV21505.1 | EEV21506.1 | TREVI0001_0714 | TREVI0001_0715 | Hypothetical protein. | Glycosyltransferase family 28 C-terminal domain protein; Identified by match to protein family HMM PF00534; match to protein family HMM PF04101. | 0.456 |
EEV21505.1 | EEV21507.1 | TREVI0001_0714 | TREVI0001_0716 | Hypothetical protein. | Outer membrane insertion signal domain protein. | 0.453 |
EEV21506.1 | EEV21503.1 | TREVI0001_0715 | TREVI0001_0712 | Glycosyltransferase family 28 C-terminal domain protein; Identified by match to protein family HMM PF00534; match to protein family HMM PF04101. | Hypothetical protein. | 0.421 |
EEV21506.1 | EEV21504.1 | TREVI0001_0715 | TREVI0001_0713 | Glycosyltransferase family 28 C-terminal domain protein; Identified by match to protein family HMM PF00534; match to protein family HMM PF04101. | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | 0.468 |
EEV21506.1 | EEV21505.1 | TREVI0001_0715 | TREVI0001_0714 | Glycosyltransferase family 28 C-terminal domain protein; Identified by match to protein family HMM PF00534; match to protein family HMM PF04101. | Hypothetical protein. | 0.456 |
EEV21506.1 | EEV21507.1 | TREVI0001_0715 | TREVI0001_0716 | Glycosyltransferase family 28 C-terminal domain protein; Identified by match to protein family HMM PF00534; match to protein family HMM PF04101. | Outer membrane insertion signal domain protein. | 0.778 |
EEV21507.1 | EEV21503.1 | TREVI0001_0716 | TREVI0001_0712 | Outer membrane insertion signal domain protein. | Hypothetical protein. | 0.419 |
EEV21507.1 | EEV21504.1 | TREVI0001_0716 | TREVI0001_0713 | Outer membrane insertion signal domain protein. | Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525. | 0.419 |
EEV21507.1 | EEV21505.1 | TREVI0001_0716 | TREVI0001_0714 | Outer membrane insertion signal domain protein. | Hypothetical protein. | 0.453 |
EEV21507.1 | EEV21506.1 | TREVI0001_0716 | TREVI0001_0715 | Outer membrane insertion signal domain protein. | Glycosyltransferase family 28 C-terminal domain protein; Identified by match to protein family HMM PF00534; match to protein family HMM PF04101. | 0.778 |