Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEV19595.1 | EEV19757.1 | TREVI0001_1101 | TREVI0001_1253 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Putative selenate reductase, YgfK subunit; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR03315. | 0.930 |
| EEV19595.1 | EEV19780.1 | TREVI0001_1101 | TREVI0001_1276 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | 0.634 |
| EEV19595.1 | EEV20017.1 | TREVI0001_1101 | TREVI0001_0783 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Ferredoxin; Identified by match to protein family HMM PF00037. | 0.905 |
| EEV19595.1 | EEV20091.1 | TREVI0001_1101 | TREVI0001_0857 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.773 |
| EEV19595.1 | acpP | TREVI0001_1101 | TREVI0001_1102 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.873 |
| EEV19757.1 | EEV19595.1 | TREVI0001_1253 | TREVI0001_1101 | Putative selenate reductase, YgfK subunit; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR03315. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.930 |
| EEV19757.1 | EEV19780.1 | TREVI0001_1253 | TREVI0001_1276 | Putative selenate reductase, YgfK subunit; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR03315. | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | 0.846 |
| EEV19757.1 | EEV20017.1 | TREVI0001_1253 | TREVI0001_0783 | Putative selenate reductase, YgfK subunit; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR03315. | Ferredoxin; Identified by match to protein family HMM PF00037. | 0.510 |
| EEV19757.1 | EEV20091.1 | TREVI0001_1253 | TREVI0001_0857 | Putative selenate reductase, YgfK subunit; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR03315. | Hypothetical protein. | 0.807 |
| EEV19757.1 | EEV20422.1 | TREVI0001_1253 | TREVI0001_0414 | Putative selenate reductase, YgfK subunit; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR03315. | Hypothetical protein. | 0.930 |
| EEV19757.1 | acpP | TREVI0001_1253 | TREVI0001_1102 | Putative selenate reductase, YgfK subunit; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR03315. | Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.930 |
| EEV19757.1 | acpP-2 | TREVI0001_1253 | TREVI0001_1163 | Putative selenate reductase, YgfK subunit; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR03315. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.930 |
| EEV19780.1 | EEV19595.1 | TREVI0001_1276 | TREVI0001_1101 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.634 |
| EEV19780.1 | EEV19757.1 | TREVI0001_1276 | TREVI0001_1253 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Putative selenate reductase, YgfK subunit; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR03315. | 0.846 |
| EEV19780.1 | EEV20017.1 | TREVI0001_1276 | TREVI0001_0783 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Ferredoxin; Identified by match to protein family HMM PF00037. | 0.776 |
| EEV19780.1 | EEV20091.1 | TREVI0001_1276 | TREVI0001_0857 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Hypothetical protein. | 0.732 |
| EEV19780.1 | EEV20422.1 | TREVI0001_1276 | TREVI0001_0414 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Hypothetical protein. | 0.634 |
| EEV19780.1 | EEV21364.1 | TREVI0001_1276 | TREVI0001_0562 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Identified by match to protein family HMM PF03009. | 0.600 |
| EEV19780.1 | acpP | TREVI0001_1276 | TREVI0001_1102 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.634 |
| EEV19780.1 | acpP-2 | TREVI0001_1276 | TREVI0001_1163 | Ankyrin repeat protein; Identified by match to protein family HMM PF00023. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.635 |
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