Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEV19362.1 | EEV20732.1 | TREVI0001_1012 | TREVI0001_1903 | Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | 0.938 |
EEV19362.1 | EEV20822.1 | TREVI0001_1012 | TREVI0001_1678 | Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | Hypothetical protein. | 0.810 |
EEV19362.1 | EEV21607.1 | TREVI0001_1012 | TREVI0001_0982 | Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF03781. | 0.583 |
EEV20732.1 | EEV19362.1 | TREVI0001_1903 | TREVI0001_1012 | Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | 0.938 |
EEV20732.1 | EEV20822.1 | TREVI0001_1903 | TREVI0001_1678 | Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | Hypothetical protein. | 0.810 |
EEV20732.1 | EEV21607.1 | TREVI0001_1903 | TREVI0001_0982 | Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF03781. | 0.584 |
EEV20822.1 | EEV19362.1 | TREVI0001_1678 | TREVI0001_1012 | Hypothetical protein. | Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | 0.810 |
EEV20822.1 | EEV20732.1 | TREVI0001_1678 | TREVI0001_1903 | Hypothetical protein. | Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | 0.810 |
EEV20822.1 | EEV21607.1 | TREVI0001_1678 | TREVI0001_0982 | Hypothetical protein. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF03781. | 0.522 |
EEV21607.1 | EEV19362.1 | TREVI0001_0982 | TREVI0001_1012 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF03781. | Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226. | 0.583 |
EEV21607.1 | EEV20732.1 | TREVI0001_0982 | TREVI0001_1903 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF03781. | Adenylate/guanylate cyclase catalytic domain protein; Identified by match to protein family HMM PF00211. | 0.584 |
EEV21607.1 | EEV20822.1 | TREVI0001_0982 | TREVI0001_1678 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF03781. | Hypothetical protein. | 0.522 |