STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEV21258.1Hypothetical protein. (210 aa)    
Predicted Functional Partners:
EEV21259.1
Transcriptional regulator, HxlR family; Identified by match to protein family HMM PF01638.
  
  
 0.860
EEV19847.1
Acetyltransferase, GNAT family.
  
    0.772
flgC
Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR01395; Belongs to the flagella basal body rod proteins family.
    
   0.765
arcA
Arginine deiminase; Identified by match to protein family HMM PF02274; match to protein family HMM TIGR01078.
   
    0.734
EEV21308.1
Putative permease; Identified by match to protein family HMM PF03773.
   
    0.733
EEV20888.1
Putative permease; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03773.
   
    0.733
EEV20889.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
   
    0.733
EEV19591.1
Hypothetical protein; 1.1.1.-.
  
  
 0.719
bdhA
NADH-dependent butanol dehydrogenase A; Identified by match to protein family HMM PF00465.
  
  
 0.719
hsdR
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
   
    0.685
Your Current Organism:
Treponema vincentii
NCBI taxonomy Id: 596324
Other names: T. vincentii ATCC 35580, Treponema vincentii ATCC 35580, Treponema vincentii str. ATCC 35580, Treponema vincentii strain ATCC 35580
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