EEK15952.1 protein (Porphyromonas uenonis 603)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

EEK15952.1

Identified by match to protein family HMM PF08989. (157 aa)

Predicted Functional Partners:

EEK16633.1

0.794

EEK16629.1

0.793

EEK16641.1

0.782

EEK15955.1

0.774

EEK17188.1

0.774

EEK15890.1

0.773

EEK17163.1

0.773

EEK17345.1

0.773

EEK17268.1

0.772

EEK17254.1

0.772

Your Current Organism:

Porphyromonas uenonis 603

NCBI taxonomy Id: 596327
Other names: P. uenonis 60-3, Porphyromonas uenonis 60-3, Porphyromonas uenonis str. 60-3, Porphyromonas uenonis strain 60-3

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEK15890.1	EEK15952.1	PORUE0001_0137	PORUE0001_0216	Conjugative transposon protein TraO.	Identified by match to protein family HMM PF08989.	0.773
EEK15890.1	EEK16629.1	PORUE0001_0137	PORUE0001_1683	Conjugative transposon protein TraO.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts.	0.763
EEK15890.1	EEK16633.1	PORUE0001_0137	PORUE0001_1694	Conjugative transposon protein TraO.	Hypothetical protein.	0.768
EEK15890.1	EEK16641.1	PORUE0001_0137	PORUE0001_1680	Conjugative transposon protein TraO.	Hypothetical protein.	0.774
EEK15952.1	EEK15890.1	PORUE0001_0216	PORUE0001_0137	Identified by match to protein family HMM PF08989.	Conjugative transposon protein TraO.	0.773
EEK15952.1	EEK15955.1	PORUE0001_0216	PORUE0001_0210	Identified by match to protein family HMM PF08989.	Conjugative transposon protein TraO; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	0.774
EEK15952.1	EEK16629.1	PORUE0001_0216	PORUE0001_1683	Identified by match to protein family HMM PF08989.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts.	0.793
EEK15952.1	EEK16633.1	PORUE0001_0216	PORUE0001_1694	Identified by match to protein family HMM PF08989.	Hypothetical protein.	0.794
EEK15952.1	EEK16641.1	PORUE0001_0216	PORUE0001_1680	Identified by match to protein family HMM PF08989.	Hypothetical protein.	0.782
EEK15952.1	EEK17163.1	PORUE0001_0216	PORUE0001_0770	Identified by match to protein family HMM PF08989.	Conjugative transposon protein TraO; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	0.773
EEK15952.1	EEK17188.1	PORUE0001_0216	PORUE0001_1961	Identified by match to protein family HMM PF08989.	Conjugative transposon protein TraO; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	0.774
EEK15952.1	EEK17254.1	PORUE0001_0216	PORUE0001_1905	Identified by match to protein family HMM PF08989.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	0.772
EEK15952.1	EEK17268.1	PORUE0001_0216	PORUE0001_0514	Identified by match to protein family HMM PF08989.	Conjugative transposon protein TraO.	0.772
EEK15952.1	EEK17345.1	PORUE0001_0216	PORUE0001_1875	Identified by match to protein family HMM PF08989.	Conjugative transposon protein TraO; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	0.773
EEK15955.1	EEK15952.1	PORUE0001_0210	PORUE0001_0216	Conjugative transposon protein TraO; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	Identified by match to protein family HMM PF08989.	0.774
EEK15955.1	EEK16629.1	PORUE0001_0210	PORUE0001_1683	Conjugative transposon protein TraO; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts.	0.767
EEK15955.1	EEK16633.1	PORUE0001_0210	PORUE0001_1694	Conjugative transposon protein TraO; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	Hypothetical protein.	0.736
EEK15955.1	EEK16641.1	PORUE0001_0210	PORUE0001_1680	Conjugative transposon protein TraO; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	Hypothetical protein.	0.774
EEK16629.1	EEK15890.1	PORUE0001_1683	PORUE0001_0137	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts.	Conjugative transposon protein TraO.	0.763
EEK16629.1	EEK15952.1	PORUE0001_1683	PORUE0001_0216	Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts.	Identified by match to protein family HMM PF08989.	0.793