Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEK16837.1 | EEK16850.1 | PORUE0001_0479 | PORUE0001_0480 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.578 |
EEK16837.1 | lpdA | PORUE0001_0479 | PORUE0001_0477 | Hypothetical protein. | Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | 0.528 |
EEK16837.1 | panE | PORUE0001_0479 | PORUE0001_0478 | Hypothetical protein. | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.528 |
EEK16850.1 | EEK16837.1 | PORUE0001_0480 | PORUE0001_0479 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein. | 0.578 |
EEK16850.1 | lpdA | PORUE0001_0480 | PORUE0001_0477 | Hypothetical protein; Identified by glimmer; putative. | Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | 0.407 |
EEK16850.1 | panE | PORUE0001_0480 | PORUE0001_0478 | Hypothetical protein; Identified by glimmer; putative. | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.407 |
lpdA | EEK16837.1 | PORUE0001_0477 | PORUE0001_0479 | Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | Hypothetical protein. | 0.528 |
lpdA | EEK16850.1 | PORUE0001_0477 | PORUE0001_0480 | Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | Hypothetical protein; Identified by glimmer; putative. | 0.407 |
lpdA | panE | PORUE0001_0477 | PORUE0001_0478 | Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.778 |
panE | EEK16837.1 | PORUE0001_0478 | PORUE0001_0479 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | Hypothetical protein. | 0.528 |
panE | EEK16850.1 | PORUE0001_0478 | PORUE0001_0480 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | Hypothetical protein; Identified by glimmer; putative. | 0.407 |
panE | lpdA | PORUE0001_0478 | PORUE0001_0477 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350. | 0.778 |