STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEK16204.1Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. (87 aa)    
Predicted Functional Partners:
EEK16203.1
Putative conjugative transposon TraM protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
 
     0.946
EEK16810.1
Putative conjugative transposon TraJ protein; Identified by match to protein family HMM PF07863.
  
     0.774
traM
Conjugative transposon TraM protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
  
     0.774
EEK16806.1
Putative conjugative transposon TraJ protein; Identified by match to protein family HMM PF07863.
  
     0.774
EEK17489.1
Conjugative transposon protein TraE.
 
     0.774
EEK15937.1
Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
  
     0.774
EEK17245.1
Putative conjugative transposon TraM protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
  
     0.774
EEK17242.1
Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
  
     0.774
EEK17633.1
Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
  
  
  0.774
EEK15848.1
Conjugative transposon protein TraE.
 
     0.774
Your Current Organism:
Porphyromonas uenonis 603
NCBI taxonomy Id: 596327
Other names: P. uenonis 60-3, Porphyromonas uenonis 60-3, Porphyromonas uenonis str. 60-3, Porphyromonas uenonis strain 60-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.