STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEK16239.1Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (194 aa)    
Predicted Functional Partners:
pgk
Phosphoglycerate kinase; Identified by match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family.
       0.778
EEK16213.1
Hypothetical protein; Identified by glimmer; putative.
       0.661
manB
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880.
       0.623
EEK16495.1
Acetyltransferase, GNAT family.
  
     0.581
EEK16057.1
Alcohol dehydrogenase, iron-dependent; Identified by match to protein family HMM PF00465.
  
    0.574
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.540
EEK17240.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690.
  
  
 0.441
EEK16308.1
Sodium bile acid symporter family protein; Identified by match to protein family HMM PF01758.
  
     0.410
EEK17075.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.400
Your Current Organism:
Porphyromonas uenonis 603
NCBI taxonomy Id: 596327
Other names: P. uenonis 60-3, Porphyromonas uenonis 60-3, Porphyromonas uenonis str. 60-3, Porphyromonas uenonis strain 60-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.