STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEK16226.1Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719. (477 aa)    
Predicted Functional Partners:
EEK16212.1
Hypothetical protein.
  
 0.909
EEK17236.1
Hypothetical protein.
    0.780
EEK17458.1
Hypothetical protein; Identified by glimmer; putative.
  
 
   0.780
EEK15863.1
Hypothetical protein.
    0.776
EEK17088.1
Hypothetical protein.
  
   0.765
EEK16347.1
Outer membrane protein 40; Identified by match to protein family HMM PF00691.
  
     0.764
EEK16320.1
Hypothetical protein.
  
     0.755
EEK16376.1
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF07719.
  
     0.752
EEK16400.1
Hypothetical protein.
  
   0.751
EEK16177.1
Hypothetical protein.
  
     0.746
Your Current Organism:
Porphyromonas uenonis 603
NCBI taxonomy Id: 596327
Other names: P. uenonis 60-3, Porphyromonas uenonis 60-3, Porphyromonas uenonis str. 60-3, Porphyromonas uenonis strain 60-3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.