node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplJ | PORUE0001_0671 | PORUE0001_0672 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L10; Identified by match to protein family HMM PF00466. | 0.999 |
rplA | rplL | PORUE0001_0671 | PORUE0001_0673 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.999 |
rplA | rplM | PORUE0001_0671 | PORUE0001_0643 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplA | rplT | PORUE0001_0671 | PORUE0001_0600 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.997 |
rplA | rplU | PORUE0001_0671 | PORUE0001_0495 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
rplA | rpmA | PORUE0001_0671 | PORUE0001_0494 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family. | 0.996 |
rplA | rpmI | PORUE0001_0671 | PORUE0001_0599 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family. | 0.996 |
rplA | rpsB | PORUE0001_0671 | PORUE0001_0641 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. | 0.997 |
rplA | rpsI | PORUE0001_0671 | PORUE0001_0642 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
rplA | rpsP | PORUE0001_0671 | PORUE0001_0120 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. | 0.997 |
rplJ | rplA | PORUE0001_0672 | PORUE0001_0671 | Ribosomal protein L10; Identified by match to protein family HMM PF00466. | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.999 |
rplJ | rplL | PORUE0001_0672 | PORUE0001_0673 | Ribosomal protein L10; Identified by match to protein family HMM PF00466. | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.999 |
rplJ | rplM | PORUE0001_0672 | PORUE0001_0643 | Ribosomal protein L10; Identified by match to protein family HMM PF00466. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplJ | rplT | PORUE0001_0672 | PORUE0001_0600 | Ribosomal protein L10; Identified by match to protein family HMM PF00466. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.997 |
rplJ | rplU | PORUE0001_0672 | PORUE0001_0495 | Ribosomal protein L10; Identified by match to protein family HMM PF00466. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.997 |
rplJ | rpmA | PORUE0001_0672 | PORUE0001_0494 | Ribosomal protein L10; Identified by match to protein family HMM PF00466. | Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family. | 0.996 |
rplJ | rpmI | PORUE0001_0672 | PORUE0001_0599 | Ribosomal protein L10; Identified by match to protein family HMM PF00466. | Ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family. | 0.997 |
rplJ | rpsB | PORUE0001_0672 | PORUE0001_0641 | Ribosomal protein L10; Identified by match to protein family HMM PF00466. | Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. | 0.997 |
rplJ | rpsI | PORUE0001_0672 | PORUE0001_0642 | Ribosomal protein L10; Identified by match to protein family HMM PF00466. | Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
rplJ | rpsP | PORUE0001_0672 | PORUE0001_0120 | Ribosomal protein L10; Identified by match to protein family HMM PF00466. | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. | 0.996 |