EEK15925.1 protein (Porphyromonas uenonis 603)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

EEK15925.1

Hypothetical protein. (93 aa)

Predicted Functional Partners:

EEK17490.1

0.903

EEK16739.1

0.873

EEK17421.1

0.771

EEK16798.1

0.762

EEK16063.1

0.762

EEK17498.1

0.738

EEK17499.1

0.737

EEK17491.1

0.734

EEK15851.1

0.723

EEK15912.1

0.713

Your Current Organism:

Porphyromonas uenonis 603

NCBI taxonomy Id: 596327
Other names: P. uenonis 60-3, Porphyromonas uenonis 60-3, Porphyromonas uenonis str. 60-3, Porphyromonas uenonis strain 60-3

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEK15851.1	EEK15912.1	PORUE0001_1930	PORUE0001_0767	Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.	Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.634
EEK15851.1	EEK15925.1	PORUE0001_1930	PORUE0001_0747	Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.	Hypothetical protein.	0.723
EEK15851.1	EEK16063.1	PORUE0001_1930	PORUE0001_2037	Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF07863.	0.669
EEK15851.1	EEK16739.1	PORUE0001_1930	PORUE0001_1873	Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	0.771
EEK15851.1	EEK16798.1	PORUE0001_1930	PORUE0001_2036	Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF07863.	0.668
EEK15851.1	EEK17421.1	PORUE0001_1930	PORUE0001_2041	Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	0.675
EEK15851.1	EEK17490.1	PORUE0001_1930	PORUE0001_1585	Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.	TraG family protein.	0.773
EEK15851.1	EEK17498.1	PORUE0001_1930	PORUE0001_1588	Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.	Conjugative transposon protein TraA.	0.569
EEK15851.1	EEK17499.1	PORUE0001_1930	PORUE0001_1594	Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.	Conjugative transposon protein TraI.	0.711
EEK15912.1	EEK15851.1	PORUE0001_0767	PORUE0001_1930	Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.	0.634
EEK15912.1	EEK15925.1	PORUE0001_0767	PORUE0001_0747	Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein.	0.713
EEK15912.1	EEK16063.1	PORUE0001_0767	PORUE0001_2037	Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF07863.	0.766
EEK15912.1	EEK16739.1	PORUE0001_0767	PORUE0001_1873	Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	0.506
EEK15912.1	EEK16798.1	PORUE0001_0767	PORUE0001_2036	Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF07863.	0.766
EEK15912.1	EEK17421.1	PORUE0001_0767	PORUE0001_2041	Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.	0.773
EEK15912.1	EEK17490.1	PORUE0001_0767	PORUE0001_1585	Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	TraG family protein.	0.618
EEK15912.1	EEK17491.1	PORUE0001_0767	PORUE0001_1586	Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.	0.660
EEK15912.1	EEK17498.1	PORUE0001_0767	PORUE0001_1588	Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Conjugative transposon protein TraA.	0.764
EEK15912.1	EEK17499.1	PORUE0001_0767	PORUE0001_1594	Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Conjugative transposon protein TraI.	0.785
EEK15925.1	EEK15851.1	PORUE0001_0747	PORUE0001_1930	Hypothetical protein.	Relaxase/mobilization nuclease domain protein; Identified by match to protein family HMM PF03432.	0.723