Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EEK15889.1 | EEK15912.1 | PORUE0001_0136 | PORUE0001_0767 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.774 |
| EEK15889.1 | EEK15926.1 | PORUE0001_0136 | PORUE0001_0769 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | Putative conjugative transposon TraN protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.774 |
| EEK15889.1 | EEK15930.1 | PORUE0001_0136 | PORUE0001_0768 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.771 |
| EEK15889.1 | EEK17492.1 | PORUE0001_0136 | PORUE0001_1592 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | Conjugative transposon protein TraF; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | 0.773 |
| EEK15889.1 | EEK17499.1 | PORUE0001_0136 | PORUE0001_1594 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | Conjugative transposon protein TraI. | 0.773 |
| EEK15889.1 | traN | PORUE0001_0136 | PORUE0001_1599 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | Conjugative transposon TraN protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.774 |
| EEK15889.1 | traN-2 | PORUE0001_0136 | PORUE0001_1819 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | Conjugative transposon TraN protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.774 |
| EEK15889.1 | traN-7 | PORUE0001_0136 | PORUE0001_1910 | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | Conjugative transposon TraN protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.774 |
| EEK15912.1 | EEK15889.1 | PORUE0001_0767 | PORUE0001_0136 | Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.774 |
| EEK15912.1 | EEK15926.1 | PORUE0001_0767 | PORUE0001_0769 | Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Putative conjugative transposon TraN protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.933 |
| EEK15912.1 | EEK15930.1 | PORUE0001_0767 | PORUE0001_0768 | Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.946 |
| EEK15912.1 | EEK17270.1 | PORUE0001_0767 | PORUE0001_0515 | Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.773 |
| EEK15912.1 | EEK17492.1 | PORUE0001_0767 | PORUE0001_1592 | Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Conjugative transposon protein TraF; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | 0.775 |
| EEK15912.1 | EEK17499.1 | PORUE0001_0767 | PORUE0001_1594 | Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Conjugative transposon protein TraI. | 0.785 |
| EEK15912.1 | traN | PORUE0001_0767 | PORUE0001_1599 | Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Conjugative transposon TraN protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.773 |
| EEK15912.1 | traN-2 | PORUE0001_0767 | PORUE0001_1819 | Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Conjugative transposon TraN protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.774 |
| EEK15912.1 | traN-3 | PORUE0001_0767 | PORUE0001_1820 | Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Conjugative transposon TraN protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.773 |
| EEK15912.1 | traN-7 | PORUE0001_0767 | PORUE0001_1910 | Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Conjugative transposon TraN protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.774 |
| EEK15926.1 | EEK15889.1 | PORUE0001_0769 | PORUE0001_0136 | Putative conjugative transposon TraN protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | 0.774 |
| EEK15926.1 | EEK15912.1 | PORUE0001_0769 | PORUE0001_0767 | Putative conjugative transposon TraN protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error. | Conjugative transposon protein TraK; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.933 |
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