Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEK16655.1 | prtQ | PORUE0001_0862 | PORUE0001_1130 | O-methyltransferase; Identified by match to protein family HMM PF01596. | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | 0.611 |
EEK17239.1 | porT | PORUE0001_1131 | PORUE0001_1132 | Uracil phosphoribosyltransferase. | PorT protein. | 0.546 |
EEK17239.1 | prtQ | PORUE0001_1131 | PORUE0001_1130 | Uracil phosphoribosyltransferase. | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | 0.794 |
porT | EEK17239.1 | PORUE0001_1132 | PORUE0001_1131 | PorT protein. | Uracil phosphoribosyltransferase. | 0.546 |
porT | prtQ | PORUE0001_1132 | PORUE0001_1130 | PorT protein. | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | 0.517 |
prtQ | EEK16655.1 | PORUE0001_1130 | PORUE0001_0862 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | O-methyltransferase; Identified by match to protein family HMM PF01596. | 0.611 |
prtQ | EEK17239.1 | PORUE0001_1130 | PORUE0001_1131 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | Uracil phosphoribosyltransferase. | 0.794 |
prtQ | porT | PORUE0001_1130 | PORUE0001_1132 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | PorT protein. | 0.517 |