STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEK16639.1Hypothetical protein. (504 aa)    
Predicted Functional Partners:
EEK17711.1
Identified by match to protein family HMM PF07980.
  
 
   0.768
EEK15983.1
Hypothetical protein.
    
   0.589
EEK17468.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative.
    
   0.589
EEK16047.1
TonB-dependent receptor; Identified by match to protein family HMM PF07715.
  
    0.582
EEK17653.1
Hypothetical protein; Overlaps another CDS with the same product name; this gene contains a nucleotide ambiguity which may be the result of a sequencing error.
  
     0.562
EEK16636.1
Hypothetical protein; Identified by glimmer; putative.
       0.549
EEK16020.1
Hypothetical protein.
  
     0.545
EEK17679.1
Identified by match to protein family HMM PF03372.
  
     0.528
EEK15903.1
Hypothetical protein.
  
     0.509
EEK16837.1
Hypothetical protein.
  
    0.498
Your Current Organism:
Porphyromonas uenonis 603
NCBI taxonomy Id: 596327
Other names: P. uenonis 60-3, Porphyromonas uenonis 60-3, Porphyromonas uenonis str. 60-3, Porphyromonas uenonis strain 60-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.