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WRKY39 protein (Arabidopsis lyrata) - STRING interaction network
"WRKY39" - WRKY DNA-binding protein 39 in Arabidopsis lyrata
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WRKY39WRKY DNA-binding protein 39 (332 aa)    
Predicted Functional Partners:
fgenesh2_kg.5__72__AT2G01650.1
Uncharacterized protein (459 aa)
           
  0.593
fgenesh2_kg.3__1258__AT3G12050.1
Aha1 domain-containing protein (360 aa)
           
  0.592
scaffold_303112.1
Uncharacterized protein (379 aa)
           
  0.565
fgenesh2_kg.7__1116__AT4G30700.1
Pentatricopeptide repeat-containing protein (792 aa)
           
  0.565
fgenesh2_kg.7__1865__AT4G24230.1
Uncharacterized protein (375 aa)
           
  0.536
scaffold_202328.1
UDP-glucoronosyl/UDP-glucosyl transferase family protein (473 aa)
           
  0.510
scaffold_104877.1
UDP-glucoronosyl/UDP-glucosyl transferase family protein (456 aa)
           
  0.510
fgenesh2_kg.6__259__AT5G03490.1
UDP-glucoronosyl/UDP-glucosyl transferase family protein (460 aa)
           
  0.510
fgenesh2_kg.2__2154__AT1G78600.1
Zinc finger (B-box type) family protein (290 aa)
           
  0.476
fgenesh2_kg.8__1732__AT5G58110.1
Uncharacterized protein (196 aa)
           
  0.434
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 59689
Other names: A. lyrata, Arabidopsis lyrata, lyrate rockcress
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