STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC4Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (219 aa)    
Predicted Functional Partners:
TRAPPC1
Trafficking protein particle complex 1.
   
 0.999
H0ZD04_TAEGU
Uncharacterized protein.
    
 0.998
TRAPPC6B
Trafficking protein particle complex 6B.
   
 0.998
TRAPPC5
Trafficking protein particle complex subunit 5.
   
 0.998
TRAPPC2L
Trafficking protein particle complex subunit 2-like protein; May play a role in vesicular transport from endoplasmic reticulum to Golgi; Belongs to the TRAPP small subunits family. Sedlin subfamily.
   
 0.997
TRAPPC8
Uncharacterized protein.
    
 0.996
TRAPPC10
Foie-gras_1 domain-containing protein.
    
 0.995
TRAPPC9
Trafficking protein particle complex 9.
   
 0.995
TRAPPC11
Trafficking protein particle complex 11.
    
 0.991
RAB1A
RAB1A, member RAS oncogene family.
    
 0.981
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.