STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNB3Cholinergic receptor nicotinic beta 3 subunit. (454 aa)    
Predicted Functional Partners:
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.763
CHRNA2
Neuronal acetylcholine receptor subunit alpha-2.
  
0.667
ENSTGUP00000033627
annotation not available
  
0.662
CHRNA4
Cholinergic receptor nicotinic alpha 4 subunit.
  
0.660
B4GALT1
Beta-1,4-galactosyltransferase 1.
      
 0.603
ENSTGUP00000019352
annotation not available
  
0.595
LOC100221863
Uncharacterized protein.
  
0.582
LOC100228395
Uncharacterized protein.
  
0.577
ALDOB
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
      
 0.570
CHRNG
Cholinergic receptor nicotinic gamma subunit.
  
0.563
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.