STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP8B1Cytochrome P450 family 8 subfamily B member 1; Belongs to the cytochrome P450 family. (509 aa)    
Predicted Functional Partners:
HSD3B7
LOW QUALITY PROTEIN: 3 beta-hydroxysteroid dehydrogenase type 7.
   
 0.960
CYP27A1
Cytochrome P450 family 27 subfamily A member 1; Belongs to the cytochrome P450 family.
  
  
 0.930
AKR1D1
Aldo-keto reductase family 1 member D1.
   
 
 0.906
LSS
Lanosterol synthase; Belongs to the terpene cyclase/mutase family.
  
 0.866
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.802
ERG28
Taeniopygia guttata ergosterol biosynthesis 28 homolog (ERG28), mRNA.
   
 
 0.790
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 
 0.789
SIGMAR1
Sigma non-opioid intracellular receptor 1.
   
 
 0.783
FAXDC2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
   
 0.768
CH25H
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 0.768
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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