STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN1Matrilin 1. (468 aa)    
Predicted Functional Partners:
ENSTGUP00000032818
Muscle M-line assembly protein unc-89-like.
   
 0.579
LUM
Lumican.
   
 0.575
ACAN
Aggrecan.
   
 0.469
COL16A1
Collagen alpha-1(XVI) chain isoform X1.
 
 
  0.441
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
   
 0.428
DCN
Decorin; May affect the rate of fibrils formation.
   
 0.423
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.421
MFAP2
Microfibril associated protein 2.
   
 0.403
ARID4B
AT-rich interaction domain 4B.
    
 0.402
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.