STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHAF1AChromatin assembly factor 1 subunit A. (1105 aa)    
Predicted Functional Partners:
CHAF1B
WD_REPEATS_REGION domain-containing protein.
   
 
 0.962
ASF1A
Anti-silencing function 1A histone chaperone.
   
 
 0.872
MCM5
DNA helicase; Belongs to the MCM family.
   
  
 0.843
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 
 0.797
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 
 0.797
MCM2
DNA helicase; Belongs to the MCM family.
   
 
 0.793
MCM3
DNA helicase; Belongs to the MCM family.
   
  
 0.787
POLA1
DNA polymerase.
   
 
 0.732
WDR73
WD repeat domain 73.
   
 
 0.722
MCM4
DNA helicase; Belongs to the MCM family.
   
 
 0.701
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.