STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC1Transmembrane channel-like protein. (841 aa)    
Predicted Functional Partners:
ENSTGUP00000032818
Muscle M-line assembly protein unc-89-like.
   
 0.579
C9orf85
Chromosome 9 open reading frame 85.
    
 
 0.485
KCNQ4
Potassium voltage-gated channel subfamily Q member 4.
    
 
 0.482
KCNQ4-2
KCNQ_channel domain-containing protein.
    
 
 0.482
ZFAND5
Uncharacterized protein.
    
 
 0.475
CDH23
Cadherin related 23.
    
 0.461
COL4A6
Collagen type IV alpha 6 chain.
    
 0.439
WNT8A
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 
 0.424
TRPM3
Transient receptor potential cation channel subfamily M member 3.
      
 0.408
SLC9A9
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.405
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.