STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAS2Putative breast carcinoma amplified sequence 2. (226 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
   
 0.999
PRPF19
Pre-mRNA processing factor 19.
   
 0.999
PLRG1
WD_REPEATS_REGION domain-containing protein.
   
 0.998
CDC40
Cell division cycle 40.
   
 0.994
CWC15
Uncharacterized protein.
   
 0.994
PRPF8
MPN domain-containing protein.
    
 0.991
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.983
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
   
 0.980
CTNNBL1
Catenin beta like 1.
   
 0.980
SF3B4
Splicing factor 3b subunit 4.
   
   0.973
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.