STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUFY1RUN and FYVE domain containing 1. (692 aa)    
Predicted Functional Partners:
RAB4A
RAB4A, member RAS oncogene family.
    
 0.959
BTK
Tyrosine-protein kinase.
    
 0.678
RAB14
Uncharacterized protein.
    
 0.669
ENSTGUP00000022514
annotation not available
    
 0.611
C17orf67
Chromosome 17 open reading frame 67.
      
 0.565
RUFY2
RUN and FYVE domain containing 2.
  
 
  
0.559
ITK
Tyrosine-protein kinase.
    
  0.516
TEC
Tyrosine-protein kinase.
    
  0.516
TXK
TXK tyrosine kinase.
    
  0.516
SMDT1
Essential MCU regulator, mitochondrial.
     
 0.511
Your Current Organism:
Taeniopygia guttata
NCBI taxonomy Id: 59729
Other names: Poephila guttata, T. guttata, Taenopygia guttata, zebra finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.